Difference between revisions of "Library"

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m (Protected "Library" ([edit=autoconfirmed] (indefinite) [move=autoconfirmed] (indefinite)))
 
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By default GenPlay starts with configuration files for the February 2009 hg19 (GRCh37) assembly. Configuration files for other assemblies can be found in the GenPlay library.  
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The library contains a few useful files for human and mouse genomes to get you started, including gene annotations and a few data files.
  
The library also contains a few useful files to get your started including gene annotations and a few data files.  
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You can easily load data file downloaded from the [http://genome.ucsc.edu/cgi-bin/hgTables table browser of the UCSC genome browser] in GenPlay. Just select a table, set the output format to BED and click on the "get output" button.
  
If you have files of general interest that you would like to make available to other GenPlay users, please send them [mailto:julien.lajugie@einstein.yu.edu here]
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If you have files of general interest that you would like to make available to other GenPlay users, please send them [mailto:julien.lajugie@einstein.yu.edu?Subject=GenPlay%20library here]
  
  
'''Links to the library:'''
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=== Links to the library ===
  
 
*Human
 
*Human
**[http://www.genplay.net/library/Human/hg18 hg18]
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**[http://genplay.net/library/Human/hg18 hg18]
**[http://www.genplay.net/library/Human/hg19 hg19]
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**[http://genplay.net/library/Human/hg19 hg19]
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**[http://genplay.net/library/Human/hg38 hg38]
 
*mouse
 
*mouse
**[http://www.genplay.net/library/Mouse/mm8 mm8]
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**[http://genplay.net/library/Mouse/mm8 mm8]
**[http://www.genplay.net/library/Mouse/mm9 mm9]
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**[http://genplay.net/library/Mouse/mm9 mm9]

Latest revision as of 12:53, 3 January 2017

The library contains a few useful files for human and mouse genomes to get you started, including gene annotations and a few data files.

You can easily load data file downloaded from the table browser of the UCSC genome browser in GenPlay. Just select a table, set the output format to BED and click on the "get output" button.

If you have files of general interest that you would like to make available to other GenPlay users, please send them here


Links to the library